Changelog

This document tracks all notable changes to PICASSO. The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

For the most up-to-date changelog, see the CHANGELOG.md file in the repository.

Version History

v1.0.0 - Initial Release

• Complete phylogenetic inference algorithm for scRNA-seq-inferred CNA data

• Noise-aware termination criteria with confidence thresholds

• CloneTree class for advanced phylogenetic analysis

• iTOL visualization export utilities

• Comprehensive documentation and examples

• Support for Python 3.10+